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gloB protein (Agrobacterium rhizogenes) - STRING interaction network
"gloB" - Hydroxyacylglutathione hydrolase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloBHydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid (256 aa)    
Predicted Functional Partners:
CN09_27565
Cupin; Derived by automated computational analysis using gene prediction method- Protein Homology (141 aa)
              0.954
CN09_08075
Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology (146 aa)
 
   
  0.918
CN09_27555
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
         
  0.893
dnaQ
DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3’-5’ exonuclease (236 aa)
         
  0.841
hisC
Histidinol-phosphate aminotransferase; Catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily (369 aa)
              0.840
CN09_27545
Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)
              0.836
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids; Belongs to the RNase H family (146 aa)
         
  0.815
CN09_10540
Glutathione S-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (198 aa)
         
  0.750
psd
Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer); Belongs to the phosphatidylserine decarboxylase family. PSD-A subfamily (232 aa)
              0.744
CN09_13795
2-hydroxymuconic semialdehyde hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (270 aa)
   
   
  0.739
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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