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CN09_27575 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27575" - Membrane protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_27575Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (299 aa)    
Predicted Functional Partners:
CN09_27580
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
              0.912
rpmB
50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bL28 family (101 aa)
   
        0.687
CN09_06305
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source (559 aa)
 
        0.685
CN09_27750
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (293 aa)
              0.652
CN09_15860
Phasin; Derived by automated computational analysis using gene prediction method- Protein Homology (149 aa)
 
          0.497
CN09_04320
tRNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (113 aa)
     
      0.437
ags
Agropine synthesis cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase M24B family (396 aa)
              0.434
CN09_27590
Probable queuosine precursor transporter; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage (212 aa)
   
        0.417
CN09_02160
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (63 aa)
 
          0.412
CN09_10375
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (369 aa)
   
   
  0.406
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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