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CN09_27605 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27605" - Cobalamin biosynthesis protein CobS in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_27605Cobalamin biosynthesis protein CobS; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)    
Predicted Functional Partners:
CN09_27600
Cobalt chelatase; Derived by automated computational analysis using gene prediction method- Protein Homology (632 aa)
 
   
  0.988
CN09_27595
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (338 aa)
              0.879
CN09_27610
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method- Protein Homology (206 aa)
 
          0.873
CN09_27615
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the BolA/IbaG family (95 aa)
              0.812
CN09_25140
Ribulose 1,5-bisphosphate carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the RuBisCO large chain family (419 aa)
         
  0.744
CN09_05150
X-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology (611 aa)
              0.744
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
   
   
  0.733
CN09_23200
Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method- Protein Homology (116 aa)
              0.713
CN09_02785
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (293 aa)
         
  0.687
secE
Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation (66 aa)
 
     
  0.665
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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