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CN09_27615 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27615" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_27615Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the BolA/IbaG family (95 aa)    
Predicted Functional Partners:
CN09_27610
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method- Protein Homology (206 aa)
              0.885
CN09_27605
Cobalamin biosynthesis protein CobS; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)
              0.812
CN09_27600
Cobalt chelatase; Derived by automated computational analysis using gene prediction method- Protein Homology (632 aa)
              0.809
CN09_27595
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (338 aa)
              0.794
CN09_24065
Glutathione S-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (245 aa)
 
     
  0.758
CN09_06630
Glutaredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily (111 aa)
 
 
  0.736
CN09_27300
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
 
        0.707
CN09_01480
UPF0176 protein CN09_01480; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0176 family (314 aa)
   
        0.675
msrB
Peptide methionine sulfoxide reductase MsrB; This stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; Derived by automated computational analysis using gene prediction method- Protein Homology (149 aa)
         
  0.656
CN09_28270
Probable intracellular septation protein A; Involved in cell division; probably involved in intracellular septation (224 aa)
              0.652
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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