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CN09_27655 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27655" - Response regulator SirA in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_27655Response regulator SirA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sulfur carrier protein TusA family (74 aa)    
Predicted Functional Partners:
CN09_07710
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme; In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family (478 aa)
         
  0.999
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (491 aa)
              0.999
CN09_23555
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (972 aa)
         
  0.973
CN09_13785
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (327 aa)
              0.967
CN09_27650
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (434 aa)
              0.954
mnmA
tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 (399 aa)
         
  0.906
CN09_06825
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method- Protein Homology (388 aa)
     
 
  0.904
CN09_07180
Sulfurtransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (131 aa)
         
  0.837
CN09_16735
Acetoin utilization protein; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
              0.744
CN09_21400
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (160 aa)
         
  0.739
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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