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CN09_27690 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27690" - Acetyltransferase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_27690Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (197 aa)    
Predicted Functional Partners:
CN09_27915
Uridylate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
 
     
  0.783
queE
7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds (245 aa)
         
  0.659
thrS
Threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction- L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) (662 aa)
              0.549
CN09_01785
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (192 aa)
 
          0.522
CN09_09765
Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (164 aa)
              0.516
CN09_10070
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (411 aa)
              0.514
CN09_20765
Acetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (157 aa)
 
     
  0.495
CN09_32650
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (565 aa)
 
          0.472
CN09_27685
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (81 aa)
              0.445
CN09_14585
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method- Protein Homology (761 aa)
              0.428
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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