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CN09_27745 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27745" - Haloacid dehalogenase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_27745Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)    
Predicted Functional Partners:
CN09_10375
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (369 aa)
   
   
  0.772
CN09_25345
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (279 aa)
 
        0.755
CN09_25410
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (299 aa)
 
        0.722
CN09_25355
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)
 
          0.721
CN09_25330
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (536 aa)
 
     
  0.706
CN09_25305
D-amino acid oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (441 aa)
 
          0.665
CN09_25320
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology (280 aa)
 
          0.650
CN09_25325
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (316 aa)
 
          0.648
CN09_16980
Threonine synthase; Catalyzes the formation of L-threonine from O-phospho-L-homoserine; Derived by automated computational analysis using gene prediction method- Protein Homology (465 aa)
            0.620
CN09_27755
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (142 aa)
              0.595
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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