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CN09_27920 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27920" - Acyltransferase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_27920Acyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (318 aa)    
Predicted Functional Partners:
CN09_27915
Uridylate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
         
  0.857
CN09_17085
Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family (888 aa)
         
  0.834
CN09_06240
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (535 aa)
              0.787
CN09_17575
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the helicase family. UvrD subfamily (1187 aa)
 
        0.763
CN09_17570
Recombinase RecB; Derived by automated computational analysis using gene prediction method- Protein Homology (1063 aa)
   
        0.748
CN09_17560
Chlorosome protein; Derived by automated computational analysis using gene prediction method- Protein Homology (503 aa)
            0.731
CN09_17565
Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (243 aa)
         
  0.718
CN09_02360
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
   
        0.710
pepN
Derived by automated computational analysis using gene prediction method- Protein Homology (882 aa)
              0.696
CN09_02355
UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology (306 aa)
 
 
 
  0.667
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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