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CN09_28190 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_28190" - Acyl-CoA thioesterase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_28190Acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (216 aa)    
Predicted Functional Partners:
CN09_28200
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology (848 aa)
 
          0.974
CN09_28185
RNA 2’,3’-cyclic phosphodiesterase; Hydrolyzes RNA 2’,3’-cyclic phosphodiester to an RNA 2’- phosphomonoester (198 aa)
            0.969
CN09_28195
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (236 aa)
 
        0.935
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
         
  0.851
CN09_28175
Putative pterin-4-alpha-carbinolamine dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (101 aa)
 
 
      0.750
CN09_10895
Putative SOS response-associated peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SOS response-associated peptidase family (254 aa)
              0.737
CN09_02050
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
              0.719
CN09_05655
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (186 aa)
              0.652
CN09_28205
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the BI1 family (247 aa)
 
          0.645
CN09_16300
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (606 aa)
              0.499
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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