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CN09_28475 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_28475" - Acyl-CoA thioesterase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Databases
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[Homology]
Score
CN09_28475Acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)    
Predicted Functional Partners:
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
              0.999
CN09_28480
2-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (404 aa)
         
  0.889
CN09_02370
4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (151 aa)
         
  0.869
lcdH
L-carnitine dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3-dehydrocarnitine (496 aa)
         
  0.860
CN09_28470
Nitrogen regulatory protein P-II 1; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method- Protein Homology (116 aa)
              0.848
CN09_28465
Ammonium transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (453 aa)
         
  0.837
CN09_10455
Beta-lactamase; Derived by automated computational analysis using gene prediction method- Protein Homology (389 aa)
         
  0.724
CN09_17415
ATP-dependent helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (822 aa)
 
     
  0.717
CN09_02010
Pyruvate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the pyruvate kinase family (479 aa)
   
   
  0.669
CN09_06100
Uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
              0.652
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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