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CN09_28500 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_28500" - UPF0434 protein CN09_28500 in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_28500UPF0434 protein CN09_28500; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0434 family (62 aa)    
Predicted Functional Partners:
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (491 aa)
              0.999
CN09_28505
Peptidase S16; Derived by automated computational analysis using gene prediction method- Protein Homology (219 aa)
              0.993
pheT
Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily (807 aa)
         
  0.989
CN09_28510
Thioredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (325 aa)
              0.847
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (367 aa)
   
   
  0.832
CN09_28515
DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (169 aa)
 
          0.832
CN09_06210
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (124 aa)
 
          0.803
CN09_32710
Microcystinase C; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) (480 aa)
           
  0.779
CN09_08615
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (762 aa)
           
  0.779
CN09_28450
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
              0.744
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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