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CN09_28580 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_28580" - Hemolysin secretion protein D in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_28580Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (367 aa)    
Predicted Functional Partners:
CN09_28575
ACR/RND family transmembrane transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1051 aa)
 
  0.973
CN09_28590
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)
 
 
 
  0.794
CN09_28570
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (393 aa)
 
          0.713
CN09_03145
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1109 aa)
 
  0.704
CN09_28585
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method- Protein Homology (228 aa)
 
     
  0.670
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (651 aa)
   
 
  0.562
CN09_24930
RND transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (502 aa)
 
 
  0.560
CN09_34005
Nodulation protein NodT; Derived by automated computational analysis using gene prediction method- Protein Homology (484 aa)
 
 
  0.541
CN09_29335
Efflux pump membrane transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (1059 aa)
 
  0.479
CN09_20450
ACR family transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1022 aa)
 
 
  0.470
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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