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CN09_28610 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_28610" - Sorbitol dehydrogenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_28610Sorbitol dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (183 aa)    
Predicted Functional Partners:
CN09_28615
Choline dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (546 aa)
 
          0.886
CN09_28620
Derived by automated computational analysis using gene prediction method- Protein Homology (472 aa)
 
          0.871
CN09_28605
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (83 aa)
              0.657
CN09_20395
Urease-associated protein; Derived by automated computational analysis using gene prediction method- Protein Homology (179 aa)
   
          0.635
CN09_16910
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (606 aa)
   
          0.634
CN09_25430
Acetone carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (179 aa)
   
          0.594
CN09_22140
ATP-dependent Clp protease proteolytic subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S14 family (295 aa)
   
          0.581
CN09_30500
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (477 aa)
   
          0.569
CN09_28600
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (117 aa)
              0.553
CN09_05765
Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (614 aa)
   
          0.545
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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