CN09_28635 protein (Agrobacterium rhizogenes)

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protein homology

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Score

CN09_28635

ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (213 aa)

Predicted Functional Partners:

CN09_01510

0.961

CN09_05930

0.750

polA

0.716

CN09_05945

0.573

CN09_16990

0.534

CN09_17760

0.502

CN09_28630

0.498

CN09_10415

0.497

CN09_07505

0.486

CN09_16525

0.483

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01510	CN09_05930	CN09_01510	CN09_05930	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.792
CN09_01510	CN09_05945	CN09_01510	CN09_05945	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Fur family	0.652
CN09_01510	CN09_10415	CN09_01510	CN09_10415	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.468
CN09_01510	CN09_17760	CN09_01510	CN09_17760	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.408
CN09_01510	CN09_28635	CN09_01510	CN09_28635	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.961
CN09_05930	CN09_01510	CN09_05930	CN09_01510	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	0.792
CN09_05930	CN09_05945	CN09_05930	CN09_05945	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Fur family	0.935
CN09_05930	CN09_28635	CN09_05930	CN09_28635	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.750
CN09_05930	polA	CN09_05930	CN09_13050	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.758
CN09_05945	CN09_01510	CN09_05945	CN09_01510	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Fur family	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	0.652
CN09_05945	CN09_05930	CN09_05945	CN09_05930	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Fur family	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.935
CN09_05945	CN09_28635	CN09_05945	CN09_28635	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Fur family	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.573
CN09_05945	polA	CN09_05945	CN09_13050	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Fur family	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.869
CN09_07505	CN09_10415	CN09_07505	CN09_10415	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.586
CN09_07505	CN09_16525	CN09_07505	CN09_16525	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.513
CN09_07505	CN09_16990	CN09_07505	CN09_16990	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.575
CN09_07505	CN09_17760	CN09_07505	CN09_17760	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.683
CN09_07505	CN09_28635	CN09_07505	CN09_28635	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.486
CN09_10415	CN09_01510	CN09_10415	CN09_01510	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	0.468
CN09_10415	CN09_07505	CN09_10415	CN09_07505	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.586

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