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CN09_28665 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_28665" - Fatty acid desaturase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_28665Fatty acid desaturase; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)    
Predicted Functional Partners:
CN09_28655
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (382 aa)
 
     
  0.983
CN09_28660
Carboxylesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
 
          0.977
CN09_28675
Arginase; Derived by automated computational analysis using gene prediction method- Protein Homology (317 aa)
 
          0.976
CN09_28670
Permease; Derived by automated computational analysis using gene prediction method- Protein Homology (117 aa)
 
     
  0.973
CN09_28650
Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (142 aa)
 
     
  0.967
CN09_28680
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (473 aa)
 
     
  0.957
CN09_28685
Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
 
          0.952
CN09_28645
Cyclopropane-fatty-acyl-phospholipid synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (443 aa)
         
  0.864
CN09_28690
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (459 aa)
 
     
  0.852
CN09_12660
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (497 aa)
 
          0.746
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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