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CN09_28920 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_28920" - Twitching motility protein PilT in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_28920Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method- Protein Homology (131 aa)    
Predicted Functional Partners:
CN09_28915
Transcription factor; Derived by automated computational analysis using gene prediction method- Protein Homology (86 aa)
              0.861
CN09_10255
Ribonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (143 aa)
   
          0.772
glyS
Glycine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology (742 aa)
              0.729
glyQ
Glycine--tRNA ligase alpha subunit; Derived by automated computational analysis using gene prediction method- Protein Homology (319 aa)
              0.711
CN09_14325
Coenzyme A biosynthesis bifunctional protein CoaBC; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4’-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4’-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family (403 aa)
              0.698
CN09_28910
Acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method- Protein Homology (396 aa)
              0.583
CN09_12695
P-type DNA transfer protein VirB5; Derived by automated computational analysis using gene prediction method- Protein Homology (231 aa)
   
          0.561
CN09_12715
VirB1 type IV secretion protein; Derived by automated computational analysis using gene prediction method- Protein Homology (222 aa)
   
          0.560
CN09_12685
Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
   
          0.549
CN09_12705
Type IV secretion protein VirB3; Derived by automated computational analysis using gene prediction method- Protein Homology (112 aa)
   
          0.548
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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