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CN09_29160 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_29160" - LacI family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_29160LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (340 aa)    
Predicted Functional Partners:
CN09_29170
2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (340 aa)
 
          0.999
CN09_29165
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (618 aa)
 
          0.999
CN09_33405
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (349 aa)
   
          0.764
CN09_18900
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (358 aa)
   
          0.761
CN09_29155
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (431 aa)
 
     
  0.723
CN09_06370
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (343 aa)
   
          0.721
CN09_23480
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (343 aa)
   
          0.614
CN09_29175
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (195 aa)
              0.468
CN09_01350
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)
 
     
  0.450
CN09_33975
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (68 aa)
   
          0.437
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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