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CN09_29295 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_29295" - Von Willebrand factor A in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_29295Von Willebrand factor A; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)    
Predicted Functional Partners:
CN09_29275
ATPase AAA; Derived by automated computational analysis using gene prediction method- Protein Homology (280 aa)
 
          0.942
metAA
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine; Belongs to the MetA family (308 aa)
              0.879
CN09_16860
Beta-lactamase; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
              0.733
CN09_08765
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (289 aa)
              0.706
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (201 aa)
              0.652
rnd
Ribonuclease D; Exonuclease involved in the 3’ processing of various precursor tRNAs. Initiates hydrolysis at the 3’-terminus of an RNA molecule and releases 5’-mononucleotides; Belongs to the RNase D family (381 aa)
              0.652
CN09_06760
4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (544 aa)
              0.652
CN09_03400
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (220 aa)
              0.652
CN09_06280
Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method- Protein Homology (141 aa)
              0.642
dnaX
DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity (625 aa)
              0.630
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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