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CN09_29435 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_29435" - Polyhydroxyalkanoate synthesis repressor PhaR in Agrobacterium rhizogenes
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_29435Polyhydroxyalkanoate synthesis repressor PhaR; Derived by automated computational analysis using gene prediction method- Protein Homology (190 aa)    
Predicted Functional Partners:
CN09_08165
Poly(3-hydroxyalkanoate) synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (615 aa)
 
     
  0.978
CN09_17620
Esterase; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)
 
     
  0.906
CN09_29425
Acetoacetyl-CoA reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (241 aa)
 
     
  0.737
proS
Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction- proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily (440 aa)
              0.728
CN09_11990
DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (222 aa)
              0.723
rnr
Ribonuclease R; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (792 aa)
              0.694
CN09_29430
Acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method- Protein Homology (393 aa)
         
  0.661
purD
Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GARS family (423 aa)
              0.652
CN09_20785
Acetoacetyl-CoA reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (241 aa)
 
     
  0.620
CN09_20025
UPF0262 protein CN09_20025; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0262 family (157 aa)
   
          0.489
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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