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CN09_29460 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_29460" - Amino acid transporter in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_29460Amino acid transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (213 aa)    
Predicted Functional Partners:
CN09_08040
Amino acid transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (202 aa)
   
          0.770
CN09_12090
Threonine transporter RhtB; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
   
          0.762
CN09_14215
Lysine transporter LysE; Derived by automated computational analysis using gene prediction method- Protein Homology (210 aa)
 
          0.760
CN09_02015
Amino acid transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
   
          0.712
CN09_29455
Farnesyl-diphosphate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the FPP/GGPP synthase family (304 aa)
              0.603
CN09_31395
Amino acid transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (202 aa)
 
   
  0.601
CN09_05440
Lysine transporter LysE; Derived by automated computational analysis using gene prediction method- Protein Homology (197 aa)
 
          0.539
mtgA
Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family (248 aa)
              0.425
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
         
  0.406
pdxJ
Pyridoxine 5’-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5’-phosphate (PNP) and inorganic phosphate (250 aa)
              0.404
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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