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CN09_29520 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_29520" - Amino acid ABC transporter substrate-binding protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_29520Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (257 aa)    
Predicted Functional Partners:
CN09_29525
Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (226 aa)
   
  0.987
CN09_29530
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
 
  0.897
CN09_21635
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (219 aa)
   
  0.707
glnH
Glutamine ABC transporter substrate-bindnig protein; Similar to periplasmic-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method- Protein Homology (248 aa)
     
0.667
glnP
Similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; Derived by automated computational analysis using gene prediction method- Protein Homology (218 aa)
   
  0.645
CN09_31855
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
   
  0.643
CN09_31550
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (222 aa)
   
  0.609
CN09_28390
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (274 aa)
   
  0.586
CN09_19005
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)
 
 
  0.585
CN09_21705
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (216 aa)
   
  0.582
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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