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CN09_29635 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_29635" - Glucanase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_29635Glucanase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family (425 aa)    
Predicted Functional Partners:
CN09_05700
Drug-proton antiporter; Derived by automated computational analysis using gene prediction method- Protein Homology (681 aa)
         
  0.784
CN09_24525
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (578 aa)
 
     
  0.733
CN09_23675
Chain-length determining protein; Derived by automated computational analysis using gene prediction method- Protein Homology (783 aa)
         
  0.698
CN09_27705
Cell wall anchor protein; Derived by automated computational analysis using gene prediction method- Protein Homology (497 aa)
 
 
 
  0.653
CN09_06420
Beta-xylosidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glycosyl hydrolase 43 family (536 aa)
 
     
  0.601
CN09_17375
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (275 aa)
 
     
  0.598
CN09_31895
1,3-beta-glucanase; Derived by automated computational analysis using gene prediction method- Protein Homology (431 aa)
 
     
  0.569
CN09_26605
1,3-1,4-beta-glycanase; Derived by automated computational analysis using gene prediction method- Protein Homology (479 aa)
 
     
  0.563
CN09_22655
Beta-glucosidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glycosyl hydrolase 3 family (785 aa)
 
     
  0.553
CN09_01465
Beta-glucosidase; Derived by automated computational analysis using gene prediction method- Protein Homology (457 aa)
 
     
  0.530
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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