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CN09_29885 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_29885" - AraC family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_29885AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)    
Predicted Functional Partners:
CN09_29880
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (77 aa)
              0.676
CN09_02265
Lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (869 aa)
              0.671
pheT
Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily (807 aa)
              0.614
CN09_29875
Chemotaxis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (614 aa)
              0.612
CN09_26095
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
 
 
 
  0.520
CN09_01195
6-O-methylguanine DNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (290 aa)
   
 
  0.471
CN09_27420
DNA-3-methyladenine glycosidase; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
         
  0.448
CN09_17505
Dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (202 aa)
   
   
  0.447
CN09_05240
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (301 aa)
 
 
 
  0.428
CN09_29860
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (516 aa)
     
      0.416
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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