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CN09_29930 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_29930" - Glycerophosphodiester phosphodiesterase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_29930Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (290 aa)    
Predicted Functional Partners:
CN09_29935
Inositol-1-monophosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the inositol monophosphatase superfamily (262 aa)
 
     
  0.875
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
   
   
  0.826
CN09_29920
NagC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (382 aa)
 
     
  0.789
CN09_07275
Putative 3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the DNA glycosylase MPG family (200 aa)
         
  0.787
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (259 aa)
         
  0.787
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
   
   
  0.758
CN09_10375
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (369 aa)
   
   
  0.546
CN09_15420
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method- Protein Homology (763 aa)
     
      0.488
aqpZ
Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family (228 aa)
   
 
  0.463
CN09_24840
Protein involved in propionate catabolism; Derived by automated computational analysis using gene prediction method- Protein Homology (446 aa)
 
     
  0.454
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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