CN09_29965 protein (Agrobacterium rhizogenes)

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experimentally determined

Predicted Interactions

gene neighborhood

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protein homology

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[Homology]

Score

CN09_29965

Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology (528 aa)

Predicted Functional Partners:

CN09_29960

0.969

CN09_29955

0.968

CN09_29950

0.948

CN09_29945

0.942

CN09_23180

0.800

CN09_23185

0.777

cysA

0.762

CN09_29615

0.748

CN09_29610

0.720

CN09_29970

0.707

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_23180	CN09_23185	CN09_23180	CN09_23185	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	0.973
CN09_23180	CN09_29610	CN09_23180	CN09_29610	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	0.833
CN09_23180	CN09_29945	CN09_23180	CN09_29945	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.572
CN09_23180	CN09_29950	CN09_23180	CN09_29950	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.735
CN09_23180	CN09_29955	CN09_23180	CN09_29955	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	0.844
CN09_23180	CN09_29965	CN09_23180	CN09_29965	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.800
CN09_23185	CN09_23180	CN09_23185	CN09_23180	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.973
CN09_23185	CN09_29615	CN09_23185	CN09_29615	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.832
CN09_23185	CN09_29945	CN09_23185	CN09_29945	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.652
CN09_23185	CN09_29950	CN09_23185	CN09_29950	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.770
CN09_23185	CN09_29960	CN09_23185	CN09_29960	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.835
CN09_23185	CN09_29965	CN09_23185	CN09_29965	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.777
CN09_29610	CN09_23180	CN09_29610	CN09_23180	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.833
CN09_29610	CN09_29615	CN09_29610	CN09_29615	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.980
CN09_29610	CN09_29945	CN09_29610	CN09_29945	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.651
CN09_29610	CN09_29950	CN09_29610	CN09_29950	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.791
CN09_29610	CN09_29960	CN09_29610	CN09_29960	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.834
CN09_29610	CN09_29965	CN09_29610	CN09_29965	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.720
CN09_29615	CN09_23185	CN09_29615	CN09_23185	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	0.832
CN09_29615	CN09_29610	CN09_29615	CN09_29610	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	0.980

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