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CN09_29975 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_29975" - GntR family transcriptional regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_29975GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)    
Predicted Functional Partners:
CN09_29980
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (646 aa)
 
     
  0.760
CN09_29970
Dihydrodipicolinate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the DapA family (299 aa)
 
     
  0.745
CN09_26905
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (353 aa)
              0.744
CN09_20880
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (428 aa)
              0.698
CN09_19930
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
   
          0.657
CN09_07580
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (248 aa)
   
          0.623
CN09_22835
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (219 aa)
 
     
  0.622
CN09_25145
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
   
          0.603
CN09_31885
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (229 aa)
 
     
  0.597
CN09_22985
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
 
     
  0.597
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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