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CN09_30030 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_30030" - Sugar ABC transporter permease in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_30030Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)    
Predicted Functional Partners:
CN09_30025
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (296 aa)
 
  0.972
CN09_30020
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (366 aa)
 
  0.934
CN09_30015
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (418 aa)
 
 
 
  0.911
CN09_20325
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (154 aa)
         
  0.837
CN09_08035
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (153 aa)
         
  0.837
CN09_30035
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (166 aa)
 
          0.822
CN09_18345
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
 
  0.799
CN09_13645
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)
 
  0.777
CN09_25665
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (308 aa)
 
  0.763
CN09_23465
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (448 aa)
 
 
 
  0.757
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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