CN09_30060 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_30060

Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology (804 aa)

Predicted Functional Partners:

CN09_30055

0.997

CN09_30065

0.988

CN09_30050

0.987

CN09_00705

0.656

CN09_27705

0.651

CN09_25915

0.609

CN09_11985

0.552

CN09_25910

0.515

CN09_33545

0.513

CN09_30500

0.496

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_00705	CN09_27705	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Cell wall anchor protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.685
CN09_00705	CN09_30060	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.656
CN09_11985	CN09_30060	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.552
CN09_25910	CN09_25915	Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.978
CN09_25910	CN09_27705	Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology	Cell wall anchor protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.440
CN09_25910	CN09_30055	Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology	Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.441
CN09_25910	CN09_30060	Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology	Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.515
CN09_25910	CN09_30065	Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology	Spore coat protein u; Derived by automated computational analysis using gene prediction method: Protein Homology	0.513
CN09_25910	CN09_30500	Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.791
CN09_25910	CN09_33545	Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.709
CN09_25915	CN09_25910	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology	0.978
CN09_25915	CN09_30050	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Spore coat protein U; Derived by automated computational analysis using gene prediction method: Protein Homology	0.474
CN09_25915	CN09_30055	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.554
CN09_25915	CN09_30060	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.609
CN09_25915	CN09_30065	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Spore coat protein u; Derived by automated computational analysis using gene prediction method: Protein Homology	0.582
CN09_25915	CN09_30500	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.786
CN09_25915	CN09_33545	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.672
CN09_27705	CN09_00705	Cell wall anchor protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.685
CN09_27705	CN09_25910	Cell wall anchor protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology	0.440
CN09_27705	CN09_30055	Cell wall anchor protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.448