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CN09_30350 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_30350" - GNAT family acetyltransferase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_30350GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (152 aa)    
Predicted Functional Partners:
gatB
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily (501 aa)
              0.739
trpF
N-(5’-phosphoribosyl)anthranilate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the TrpF family (222 aa)
         
  0.699
CN09_30345
Hydroxypyruvate reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (422 aa)
              0.565
CN09_30340
Tartrate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (357 aa)
         
  0.546
CN09_03405
Flavin-nucleotide-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
   
        0.536
CN09_30335
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (443 aa)
              0.496
himD
Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (102 aa)
         
  0.480
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs; Belongs to the RNA methyltransferase TrmD family (230 aa)
              0.478
rimM
Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family (190 aa)
     
 
  0.459
CN09_14230
Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
              0.435
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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