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CN09_30445 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_30445" - Glycosyl transferase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_30445Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (361 aa)    
Predicted Functional Partners:
CN09_30470
Asparagine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (653 aa)
 
   
  0.821
CN09_28745
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (441 aa)
              0.717
cpsB
Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family (475 aa)
 
     
  0.715
CN09_23675
Chain-length determining protein; Derived by automated computational analysis using gene prediction method- Protein Homology (783 aa)
   
   
  0.704
CN09_10055
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (518 aa)
 
  0.693
CN09_18165
Transport permease protein; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
 
   
  0.682
CN09_30460
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (517 aa)
 
   
  0.679
CN09_16805
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (352 aa)
         
  0.658
CN09_04445
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology (356 aa)
              0.652
CN09_23720
Succinoglycan biosynthesis protein exop; Derived by automated computational analysis using gene prediction method- Protein Homology (495 aa)
 
   
  0.637
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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