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CN09_30755 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_30755" - LysR family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_30755LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)    
Predicted Functional Partners:
CN09_29485
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
   
          0.644
CN09_13965
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (292 aa)
   
          0.610
CN09_30760
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (251 aa)
            0.532
CN09_20895
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (298 aa)
   
        0.477
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
         
  0.472
CN09_18425
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
   
          0.460
CN09_14345
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
 
   
  0.459
CN09_21550
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
   
          0.450
CN09_32330
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (299 aa)
   
        0.428
CN09_21695
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (314 aa)
   
          0.426
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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