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CN09_30920 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_30920" - Oxidoreductase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
CN09_30920Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (257 aa)    
Predicted Functional Partners:
CN09_30915
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (411 aa)
 
          0.942
CN09_30925
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (247 aa)
 
       
0.942
CN09_30930
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (281 aa)
 
          0.921
CN09_30935
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
 
          0.906
CN09_30900
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (110 aa)
 
          0.904
CN09_30940
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (357 aa)
 
          0.896
CN09_30945
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (336 aa)
 
          0.826
CN09_30905
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (293 aa)
     
  0.734
CN09_30890
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (406 aa)
 
          0.713
CN09_30910
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (369 aa)
 
          0.648
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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