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CN09_31005 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_31005" - Oxidoreductase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_31005Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family (257 aa)    
Predicted Functional Partners:
CN09_31000
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
        0.952
CN09_30985
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
 
   
  0.941
CN09_31035
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (153 aa)
 
          0.930
CN09_30995
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (252 aa)
 
        0.924
CN09_30990
Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
   
  0.889
CN09_31010
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (301 aa)
 
          0.852
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1234 aa)
   
        0.792
CN09_15090
UDP-galactose-lipid carrier transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (293 aa)
   
        0.766
CN09_30980
S-adenosylmethionine- 2-demethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
 
          0.750
CN09_31040
Acetyl-CoA carboxylase; An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method- Protein Homology (457 aa)
              0.738
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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