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CN09_31240 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_31240" - Amino acid dehydrogenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_31240Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (424 aa)    
Predicted Functional Partners:
CN09_31255
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
 
     
  0.746
CN09_21085
Hydroxyproline-2-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the proline racemase family (332 aa)
 
     
  0.638
CN09_31260
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (282 aa)
 
     
  0.619
CN09_23555
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (972 aa)
 
 
  0.596
CN09_31870
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (475 aa)
 
 
  0.592
CN09_25640
Dihydrodipicolinate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the DapA family (303 aa)
 
   
  0.589
CN09_31245
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (262 aa)
         
  0.546
CN09_31250
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (219 aa)
              0.545
CN09_32135
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
 
     
  0.542
CN09_14955
Proline racemase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the proline racemase family (345 aa)
 
     
  0.529
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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