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CN09_31610 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_31610" - Uncharacterized protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_31610Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (75 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
   
        0.976
CN09_31605
Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology (350 aa)
         
  0.866
CN09_31615
Hydantoinase; Derived by automated computational analysis using gene prediction method- Protein Homology (512 aa)
              0.853
CN09_31620
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (358 aa)
              0.846
CN09_23625
Precorrin-6Y methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (408 aa)
              0.826
murE
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan; Belongs to the MurCDEF family. MurE subfamily (487 aa)
         
  0.693
CN09_26870
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)
              0.691
CN09_31625
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (531 aa)
   
        0.674
cutC
Copper homeostasis protein CutC; Participates in the control of copper homeostasis (236 aa)
         
  0.671
CN09_13695
Beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method- Protein Homology (639 aa)
         
  0.662
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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