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CN09_31690 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_31690" - Similar to ATP-binding component of ABC transporters in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_31690Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)    
Predicted Functional Partners:
CN09_31685
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (218 aa)
 
 
  0.972
CN09_31680
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (221 aa)
 
  0.971
CN09_31675
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (275 aa)
 
 
  0.909
CN09_26490
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (225 aa)
 
  0.808
CN09_32145
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (220 aa)
 
  0.804
CN09_31555
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (223 aa)
 
  0.802
CN09_32150
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
 
  0.800
CN09_26495
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
 
  0.799
CN09_31550
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (222 aa)
 
  0.798
CN09_21710
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (216 aa)
 
  0.798
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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