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CN09_31730 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_31730" - ABC transporter permease in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_31730ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (297 aa)    
Predicted Functional Partners:
CN09_31725
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (297 aa)
 
   
  0.978
CN09_31715
Branched-chain amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
 
   
  0.970
CN09_31720
Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (252 aa)
 
   
  0.956
CN09_31735
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (363 aa)
 
   
  0.936
CN09_26825
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (324 aa)
   
  0.876
CN09_24625
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (556 aa)
 
   
  0.875
CN09_21290
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (328 aa)
   
  0.870
CN09_03035
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (463 aa)
 
   
  0.856
CN09_32845
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (368 aa)
 
   
  0.843
CN09_24635
Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (238 aa)
 
   
  0.827
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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