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CN09_31845 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_31845" - Peptide ABC transporter ATP-binding protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_31845Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)    
Predicted Functional Partners:
CN09_31850
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (236 aa)
 
  0.988
CN09_31855
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
 
  0.974
CN09_31860
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (269 aa)
 
  0.879
CN09_31685
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (218 aa)
 
 
  0.783
CN09_21710
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (216 aa)
 
  0.778
CN09_32145
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (220 aa)
 
  0.777
CN09_26495
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
 
  0.777
CN09_32150
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
 
  0.775
CN09_26490
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (225 aa)
 
  0.772
CN09_31555
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (223 aa)
 
  0.771
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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