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glnP protein (Agrobacterium rhizogenes) - STRING interaction network
"glnP" - Similar to permease component of ABC transporters in Agrobacterium rhizogenes
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnPSimilar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; Derived by automated computational analysis using gene prediction method- Protein Homology (218 aa)    
Predicted Functional Partners:
CN09_32365
Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
 
  0.971
glnH
Glutamine ABC transporter substrate-bindnig protein; Similar to periplasmic-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method- Protein Homology (248 aa)
   
  0.958
CN09_21630
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (263 aa)
   
  0.796
CN09_25605
Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (263 aa)
 
  0.796
CN09_06170
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (260 aa)
   
  0.795
CN09_21640
Amino acid transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (269 aa)
 
  0.790
CN09_30990
Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
 
  0.781
CN09_21715
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
 
  0.777
CN09_31980
Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
 
  0.776
CN09_31545
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
 
  0.774
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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