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CN09_32490 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_32490" - Pyrroloquinoline quinone biosynthesis protein PqqD in Agrobacterium rhizogenes
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
CN09_32490Pyrroloquinoline quinone biosynthesis protein PqqD; Derived by automated computational analysis using gene prediction method- Protein Homology (99 aa)    
Predicted Functional Partners:
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
         
  0.999
pqqC
Pyrroloquinoline-quinone synthase; Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ (254 aa)
 
   
  0.992
pqqB
Coenzyme PQQ synthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm (302 aa)
 
   
  0.991
pqqE
Coenzyme PQQ synthesis protein E; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the radical SAM superfamily. PqqE family (374 aa)
 
     
  0.990
CN09_07710
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme; In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family (478 aa)
   
   
  0.924
CN09_11755
Electron transfer flavoprotein-ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (554 aa)
         
  0.808
pqqA
Coenzyme PQQ synthesis protein A; Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis. PQQ is probably formed by cross-linking a specific glutamate to a specific tyrosine residue and excising these residues from the peptide (31 aa)
              0.771
CN09_07050
Proline iminopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S33 family (320 aa)
              0.723
CN09_10840
Proline iminopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S33 family (321 aa)
              0.668
ispDF
Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) (406 aa)
         
  0.569
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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