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CN09_32625 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_32625" - Acyl-CoA dehydrogenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_32625Acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (412 aa)    
Predicted Functional Partners:
CN09_32620
N5,N10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (452 aa)
   
  0.929
CN09_32640
Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (384 aa)
 
        0.839
CN09_32630
Monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (419 aa)
 
       
0.835
CN09_23120
Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (369 aa)
 
   
  0.831
CN09_32645
Dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
 
        0.830
CN09_32635
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (217 aa)
 
        0.826
CN09_21055
5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (474 aa)
   
  0.665
CN09_25800
5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (465 aa)
   
  0.613
CN09_26600
NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (186 aa)
 
        0.577
CN09_15305
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (736 aa)
   
 
  0.557
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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