STRINGSTRING
CN09_32755 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_32755" - SAM-dependent methyltransferase in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_32755SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (353 aa)    
Predicted Functional Partners:
CN09_03985
Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method- Protein Homology (729 aa)
   
 
  0.801
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
     
 
  0.605
CN09_04750
Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1258 aa)
         
  0.587
CN09_03210
Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)
   
   
  0.580
CN09_17570
Recombinase RecB; Derived by automated computational analysis using gene prediction method- Protein Homology (1063 aa)
              0.579
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
   
 
  0.564
CN09_32750
Glutathione peroxidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glutathione peroxidase family (183 aa)
         
  0.515
CN09_32740
Pilus assembly protein; Derived by automated computational analysis using gene prediction method- Protein Homology (252 aa)
 
          0.511
CN09_17085
Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family (888 aa)
   
   
  0.485
CN09_02340
Damage-inducible protein DinB; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
 
          0.482
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
Server load: low (6%) [HD]