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CN09_32870 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_32870" - NAD(FAD)-utilizing dehydrogenase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_32870NAD(FAD)-utilizing dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (402 aa)    
Predicted Functional Partners:
CN09_22925
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)
              0.999
CN09_23625
Precorrin-6Y methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (408 aa)
   
        0.807
CN09_06585
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (505 aa)
              0.744
trmJ
tRNA (cytidine/uridine-2’-O-)-methyltransferase TrmJ; Catalyzes the formation of 2’O-methylated cytidine (Cm32) or 2’O-methylated uridine (Um32) at position 32 in tRNA (280 aa)
              0.744
CN09_06945
UPF0178 protein CN09_06945; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0178 family (154 aa)
              0.725
CN09_15390
Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily (852 aa)
              0.715
CN09_08255
Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily (848 aa)
              0.715
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S (257 aa)
              0.703
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (404 aa)
              0.629
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate; Belongs to the TrpA family (279 aa)
              0.629
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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