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CN09_33025 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_33025" - Transcriptional regulator in Agrobacterium rhizogenes
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
CN09_33025Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (239 aa)    
Predicted Functional Partners:
CN09_26520
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
   
          0.779
CN09_23535
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (215 aa)
   
          0.771
CN09_07685
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (204 aa)
   
          0.756
CN09_12750
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (232 aa)
 
          0.751
CN09_26355
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (230 aa)
   
          0.751
CN09_26425
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
   
          0.741
CN09_21180
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (255 aa)
 
     
  0.687
CN09_26660
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)
 
     
  0.602
CN09_23170
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (236 aa)
 
     
  0.592
CN09_19930
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
 
     
  0.579
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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