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CN09_33100 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_33100" - LysR family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_33100LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (306 aa)    
Predicted Functional Partners:
CN09_33095
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (360 aa)
 
        0.815
CN09_33090
Nitrate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)
 
     
  0.714
CN09_24035
3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
         
  0.655
CN09_05435
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (281 aa)
              0.652
CN09_33085
Mannosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (273 aa)
 
     
  0.638
CN09_14305
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
   
          0.633
CN09_33080
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
 
     
  0.621
CN09_03560
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (335 aa)
 
          0.532
CN09_20815
Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (210 aa)
         
  0.479
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
         
  0.472
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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