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CN09_33200 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_33200" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_33200Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (131 aa)    
Predicted Functional Partners:
CN09_33195
Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (130 aa)
              0.699
CN09_33190
4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (238 aa)
              0.687
CN09_33185
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (124 aa)
              0.621
CN09_21995
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (125 aa)
   
          0.607
CN09_33205
MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (399 aa)
              0.577
CN09_23065
Peptide synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (200 aa)
 
          0.497
CN09_33180
Amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)
              0.434
CN09_20550
Peptide synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (194 aa)
 
          0.419
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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