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CN09_33210 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_33210" - Hydrogenase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Experiments
Databases
Textmining
[Homology]
Score
CN09_33210Hydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0312 family (444 aa)    
Predicted Functional Partners:
CN09_31385
Aromatic ring-cleaving dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
 
     
  0.987
CN09_16645
Threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (324 aa)
              0.983
CN09_33215
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0312 family (225 aa)
 
   
  0.968
CN09_13785
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (327 aa)
              0.944
CN09_10375
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (369 aa)
              0.920
CN09_10805
Colicin V production protein; Derived by automated computational analysis using gene prediction method- Protein Homology (203 aa)
              0.903
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA (303 aa)
         
  0.890
CN09_22080
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
              0.872
CN09_24480
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (123 aa)
              0.868
CN09_17585
Folylpolyglutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the folylpolyglutamate synthase family (450 aa)
              0.818
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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