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CN09_33720 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_33720" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_33720Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (526 aa)    
Predicted Functional Partners:
CN09_18560
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1702 aa)
              0.895
CN09_33740
Conjugal transfer system TraA; oriT nicking enzyme; Derived by automated computational analysis using gene prediction method- Protein Homology (1108 aa)
              0.498
CN09_17165
ATPase AAA; Derived by automated computational analysis using gene prediction method- Protein Homology (417 aa)
 
          0.486
CN09_33735
Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
              0.474
CN09_19360
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (119 aa)
 
     
  0.469
CN09_33730
Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method- Protein Homology (387 aa)
              0.468
CN09_33725
Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method- Protein Homology (204 aa)
              0.465
CN09_01135
Cell division protein Fic; Derived by automated computational analysis using gene prediction method- Protein Homology (198 aa)
 
     
  0.437
CN09_34590
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (205 aa)
 
          0.403
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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