CN09_33860 protein (Agrobacterium rhizogenes)

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gene neighborhood

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textmining

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protein homology

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Score

CN09_33860

Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane (199 aa)

Predicted Functional Partners:

CN09_11895

0.726

CN09_07995

0.711

CN09_33960

0.710

CN09_27105

0.708

CN09_07505

0.707

CN09_20310

0.707

CN09_02215

0.706

CN09_15220

0.705

CN09_11890

0.700

CN09_16825

0.698

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_02215	CN09_07505	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.745
CN09_02215	CN09_07995	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.714
CN09_02215	CN09_11890	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.621
CN09_02215	CN09_11895	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.742
CN09_02215	CN09_15220	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.742
CN09_02215	CN09_16825	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Invasion protein B; Derived by automated computational analysis using gene prediction method: Protein Homology	0.617
CN09_02215	CN09_33860	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	0.706
CN09_07505	CN09_02215	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.745
CN09_07505	CN09_07995	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.726
CN09_07505	CN09_11890	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.761
CN09_07505	CN09_11895	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.767
CN09_07505	CN09_15220	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.759
CN09_07505	CN09_33860	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	0.707
CN09_07995	CN09_02215	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.714
CN09_07995	CN09_07505	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.726
CN09_07995	CN09_11890	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.737
CN09_07995	CN09_11895	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.648
CN09_07995	CN09_15220	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.745
CN09_07995	CN09_16825	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Invasion protein B; Derived by automated computational analysis using gene prediction method: Protein Homology	0.769
CN09_07995	CN09_33860	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	0.711