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CN09_34060 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_34060" - Acetyltransferase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
CN09_34060Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (159 aa)    
Predicted Functional Partners:
CN09_34055
Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method- Protein Homology (256 aa)
   
        0.857
recF
DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (375 aa)
              0.750
CN09_08480
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (169 aa)
 
          0.518
CN09_04870
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (279 aa)
 
 
      0.508
CN09_28210
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (185 aa)
       
  0.473
CN09_04595
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (111 aa)
   
          0.458
CN09_16795
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (152 aa)
 
          0.428
CN09_14760
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (199 aa)
   
          0.402
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] (382 aa)
         
  0.400
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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